FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013646

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013646
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1830496
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAGTT14950.0050608125.788141
GGTAAAT15900.0099895195.44230751
CTCGCCC19906.893147E-45.4220952
GGTCAAG18600.0098881795.0399861
GTTCAAG20100.00443151175.02262641
Produced by FastQC (version 0.11.5)