FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013651

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013651
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences788680
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCGTT6100.0050243199.37667751
CTCCGGA8601.0341544E-49.1449861
CACCCAG6450.0079466478.8678661
GTTTGAT7500.0028115818.5796591
GGGGGGG2600.0077577676.0969677100-104
CGAAAAA17000.00380122575.467431
Produced by FastQC (version 0.11.5)