FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013653

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013653
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1184832
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGGGG801.3489167E-414.441071560-64
CACGAAA7850.00372182628.3182721
AAGTTGG7850.003888878.2779026
CTAAATT8700.0097238657.47387272
GTTATTT18802.8441008E-45.78886841
CTGATAT20401.4981833E-45.66359573
GATCTGC18550.00159545445.4491855
GTTAAAA20900.00118229815.20721151
GATGATT21200.00142906685.1335251
Produced by FastQC (version 0.11.5)