FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013657

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013657
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1029586
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCGCGA4402.9286064E-413.1776011
TCCGATC7007.0000715E-712.398043
CCGATCT7752.3887405E-611.1982294
CCGCGCG5500.001939421910.5195483
CTTCCGA11803.7887952E-57.9847321
CTCTATT8650.0089769587.54093931
TTCCGAT14500.0034822725.985262
CTTTAAT18602.4935984E-45.84490351
CTTCTCC19859.580725E-55.8419591
CTTTAAA18100.00677484935.20551631
CTTCCAG21450.00169234285.0683081
Produced by FastQC (version 0.11.5)