FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013662

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013662
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences921407
Sequences flagged as poor quality0
Sequence length100-151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGTAG1850.00196993037.7952347100-104
CATAGAT9700.00318291627.42159841
ACGATTT10700.0086704776.69403363
TATTGAA18750.00201954795.34779555
AAAGATT24457.16958E-55.27309132
CTGCCAT18100.00732816485.17051651
Produced by FastQC (version 0.11.5)