FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013669

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013669
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences879273
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACAACCG7803.5762554E-49.2549968
ACCGCTT10050.0043778657.1829827
CTTCAAT14405.7366087E-57.05125241
AACATAA12150.00375619236.53562645
ATTTTAC14250.00292546286.0790716
CAAAAAG21906.419038E-55.6299631
ATCAATA19705.65818E-45.5013142
CATCAAT17450.00437180935.403171
Produced by FastQC (version 0.11.5)