FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013670

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013670
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1187945
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC4250.00366131511.8084438
CTAAAAT8609.950722E-48.3523471
CTTCGAG10700.0084399636.7131021
CATTGAC14850.00490110975.80445961
TTCAATT15050.0058002055.7169562
Produced by FastQC (version 0.11.5)