FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013671

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013671
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2443787
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT8250.0062089257.8590127
CCTCAAC14454.6935224E-46.51143461
GTTCGAT18552.455201E-45.8525961
CCACCGA21753.6263448E-45.32429271
CCAACAT19450.00281087475.20966241
GTCCGAT18200.00735546375.16979271
GTTCAAC21200.00147868745.12102131
CCTGGAA24052.715614E-45.1160521
GAGTTCC19900.0039627315.0682075
Produced by FastQC (version 0.11.5)