FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013681

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013681
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1168443
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTAGG6300.0060269.172526
CTCAAAT8750.00105896778.3000211
CTCTGAA8250.00577024847.9227471
CTCGCTG11850.00271484776.7415781
CCCAGCT16000.0098893535.44688841
Produced by FastQC (version 0.11.5)