FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013682

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013682
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences663582
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTTTGA6800.0012141279.4088926
GTCCTTT6600.0098759258.6351171
GTTTTTA9402.8202575E-48.3365621
GACAGAT8000.0051974428.0144671
CGAAGAA11753.8100086E-47.2755451
TCATTTT14850.00547004635.74633032
Produced by FastQC (version 0.11.5)