FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013683

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013683
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1663719
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGATT10409.278666E-47.4619271
CCCGGAC12559.0618664E-46.7457331
CAACGAT16200.00252093565.661351
CTGCCGA22701.67752E-45.28341441
CTTCAAC20550.00137237985.1495711
Produced by FastQC (version 0.11.5)