FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013684

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013684
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences895641
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATTTAA4808.2128576E-411.6588135
CTACGAT6458.26801E-49.8129121
ATTGAAT7600.00368070938.3280631
CATTGAT12000.00433579046.4465381
ATTTTAT15752.7590015E-46.25118831
Produced by FastQC (version 0.11.5)