FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013686

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013686
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences953915
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACAAT10055.1017494E-58.6527781
CTGAAAA21806.0671664E-55.65109731
CAAAGAT18700.00168493365.4253381
CTCTTTT17550.0047232995.3679271
CTTTCCG19250.00242592985.2703281
Produced by FastQC (version 0.11.5)