FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013693

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013693
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences849233
Sequences flagged as poor quality0
Sequence length100-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAGTTC4300.00869182113.214398145
CAAACAT6557.959836E-49.8535111
CGATATA6400.0073711088.9497054
CATAAAT6450.00775496068.894471
AAACAAT8750.00119949138.1956191
TAGAGGG1800.0016144557.954355745-49
TTGAAAT11252.1814919E-47.6370813
CTTTGAT10559.0674305E-47.47704551
CATCAAC14255.799233E-57.04535631
CTTTTCT11750.0028346166.71343231
GTGTCAC2803.6506177E-46.647568745-49
CAAAAAT13050.00117073776.59417631
Produced by FastQC (version 0.11.5)