FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013696

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013696
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1364397
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAAAT9602.903251E-48.3157431
CGCTACC9500.003738848.313999145
CTTCGGA15502.89745E-77.9597021
ACAAATC13902.9947178E-46.75537732
CTTATCT12750.0058806846.26126531
CTTTGAT20401.3947973E-45.6920591
CAAAGAT19950.00372586895.09289461
CGGAAAT26101.6298542E-45.00508641
Produced by FastQC (version 0.11.5)