FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013703

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013703
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences622522
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTAAA2808.800958E-619.8484751
GGGGGGG450.00519411519.498753135-139
CGCAGTC4600.00844943610.5527893
CAAGGAT6901.5592804E-410.0502753
CATGAAT5750.00391038659.6653451
CAAAAAG15252.8869585E-56.83308171
Produced by FastQC (version 0.11.5)