FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013708

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013708
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences547752
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCA1900.00737085218.3489175
GGCGAAT2800.003775553314.9850321
TCAAGTC4650.00877785310.4982853
TCCATTT9350.0030267897.45867543
TCCAGAT10400.0085138726.7056363
CGGCTTG4600.00454084255.012942130-134
Produced by FastQC (version 0.11.5)