FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013715

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013715
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1595092
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAGTT4700.00724503210.7754181
CTCCAAG12550.00515334356.34136771
GTTTGAT18453.402579E-56.2741891
CTCCAAA14800.00436041645.86615471
CAACGAT17500.0046617615.37451551
CTTCATT29357.2953844E-65.1766071
CCAAAAT18350.0081260385.12555931
GATCTTC20050.00429325465.03534755
Produced by FastQC (version 0.11.5)