FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013716

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013716
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2917906
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT7900.0041746978.21386059
CCCCTGA10150.0047038997.1313781
CCCATGT18953.277685E-45.7295641
CCCTCGC15650.0080547945.55017141
CTCCAAT27151.0308353E-55.3321171
CACCAAC26303.4464058E-55.22922561
CAAACAA34158.0039354E-75.08698031
CTTAAAT30151.1795451E-55.0416361
Produced by FastQC (version 0.11.5)