FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013719

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013719
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1156439
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCCAT10851.1852158E-58.7590521
CCCATGT7700.00291964138.544671
CCCTGAA7850.00347608898.3813961
CTCCCGG12100.00315453746.64585451
CTTCAAG12400.0040765676.4850681
AGTTTTC16854.6242512E-46.0059366
CTTTAAT15600.0069603585.62341551
CTTTTAC21402.4917873E-45.46574931
AACTTTT20150.00442275.0229864
Produced by FastQC (version 0.11.5)