FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013724

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013724
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences505358
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCGCA4857.319963E-411.8179511
GCGGTTC4700.00801546810.6274439
TCTTCTA4800.009369398510.4060385
CTTGAAG7950.00466332078.1109061
CAACAAA8850.00135186758.0956321
CTTTATT9800.00367947327.31085061
Produced by FastQC (version 0.11.5)