FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013727

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013727
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences636355
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCGAT6102.0289608E-613.0423261
CATTGAG4958.4172096E-411.6237232
GTTTTAA7000.00135144459.2990081
GCGACCT4450.00138372466.46488053
AAATATT16000.0017227695.84364564
Produced by FastQC (version 0.11.5)