FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013730

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013730
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences588206
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCAAT4650.005999815711.0503191
CCAATTT4600.006371387710.9614773
CTTCAGA5800.002661530610.1249221
CAAGGAT7450.00247133368.70192053
CTCCATT6750.0092871138.6999331
CTTTCAA10204.917941E-47.91629931
TGAAATT13300.0013775926.4991794
Produced by FastQC (version 0.11.5)