FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013733

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013733
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1120690
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTAGA1050.00789327.4857439
CTAAAAA16105.6042154E-77.63672971
CCACAGA9750.0031998827.4178791
CTTGCAA10450.00628381976.92098761
CTTTACT10850.0090342196.6658361
CTTTAAT14906.857028E-46.3101751
GTTCATC15259.0759184E-46.1653521
CTTTGAC13200.0087279086.02702671
CTTTGAA20251.3170514E-45.71451431
CAGGAAC15950.0099999515.44132851
CTTCCTT19750.0034283695.12678771
Produced by FastQC (version 0.11.5)