FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013747

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013747
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1030889
Sequences flagged as poor quality0
Sequence length100-151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTTAGG8400.00780347277.66011956
GTTTGAT15853.1189767E-56.7966951
GGAAGTT10750.0092336396.6506463
CTTCCTC15209.491265E-46.14236351
CAACATT16750.00302831955.5739661
GATAATC19200.00278201825.21313675
TCGATTT19800.0040837965.0551633
Produced by FastQC (version 0.11.5)