FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013749

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013749
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1460977
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGTT8000.00455427738.1343361
GGGGGGG1950.00288031047.499317120-124
TCCAATC13000.0078804366.0871362
ACAACCT14350.00330016536.0145593
CCTCGAT16950.00322030935.54553271
CTTGAAA22751.19806195E-45.40302751
TCGAGAA17450.00483025335.35824253
CCTTGAA23401.8284796E-45.2529431
Produced by FastQC (version 0.11.5)