FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013755

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013755
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472315
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCCTA1900.006181532518.9163469
AACTATT3406.61733E-414.8165142
CCGATCT3850.001693963913.0833274
CGACGTA1450.001966558.92594480-84
Produced by FastQC (version 0.11.5)