FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013760

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013760
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences870320
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAAAT8250.0058295347.9132731
CCCGCAG8350.00649486347.8185031
GTTGGAA11201.781726E-47.7719641
ATTGGTT8700.0093764897.50396541
TGATCTT10900.0096113336.6227774
CTGTAAA13400.00138747526.49597021
CTTCAGC12950.0069403856.1615571
ATTTCCG17759.138132E-45.69372276
CAACAAA15700.0081308755.5443311
CTTTTTT34358.5660395E-75.06818061
Produced by FastQC (version 0.11.5)