FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013765

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013765
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences533546
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGTGTT3200.007420426213.5337669
TGTGAGT1600.0045049338.14468640-44
GAAAGTA9200.0018422787.84566164
CAAAAAC9600.00250422587.60428051
CGAAGAA10150.00431650977.1922261
CTTTTTT23251.4293888E-45.3377141
Produced by FastQC (version 0.11.5)