FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013766

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013766
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences471728
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACCGA2550.002127762216.3305342
CCCAAAA3658.244572E-515.29472351
GTAACCG3100.00751929413.50622751
AGAAATC6200.00734144038.9526064
TGGATGC6400.0095217658.6728373
CTTTTTT12350.00632614746.21541641
Produced by FastQC (version 0.11.5)