FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013768

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013768
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1253758
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCCTA3050.005368001314.2138665
TCCAAGC8900.0013182538.1184077
CTCCGAT9400.00220423777.70562931
GATTTAC11853.5777525E-47.31684265
GTCTGCT14951.2215065E-57.2675171
GATACCC10550.0069576226.8487035
ACTTCTT19400.00277666845.2141934
AATTTTG19600.0031564815.16098645
AAAGAAC25551.2432896E-45.09231952
Produced by FastQC (version 0.11.5)