FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013781

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013781
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences692355
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGACGTG2750.002898758315.5925555
CTATTGC4250.003601712611.8332341
CTCAAAT6305.469212E-410.2635181
CTTCAGG8250.00635105567.83759641
Produced by FastQC (version 0.11.5)