FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013783

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013783
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences990380
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGAGA5550.002559122910.1742472
TCACCCA8257.587431E-59.4088038
CTCAAAT7650.00371397368.3199481
CACAAAT7900.0049621438.056661
TAATGTA8250.0074617647.69854
CCAGAAT12206.380606E-46.95602271
CTTTGAT14858.630544E-46.19093851
CAAAGAA21851.4635229E-55.82586771
CTTTGAA17100.0046376295.3763411
Produced by FastQC (version 0.11.5)