FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013797

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013797
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences896917
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATGGAG7500.00316609338.4680675
GTTCGAT7850.00456836548.1308531
ATCGAAA11503.1374823E-47.40025421
TATCAGG10550.00107627147.3577217
GTTGAAA11450.00242775776.8131881
AAAGTAA13000.0096054125.97107365
Produced by FastQC (version 0.11.5)