FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013804

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013804
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences854941
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTCACGC7502.6303934E-49.5426957
CTCAATT6100.0048172879.4248461
CTGGCGC6350.00670378479.0537891
GTTTTAT15402.0652831E-56.99978351
CAACGGA10600.00766776276.77966451
GGAAAAC15650.0089903875.49391752
Produced by FastQC (version 0.11.5)