FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013805

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013805
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2241847
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACAAAT20301.8189894E-128.93100551
CCCAGAT16956.933161E-56.41767741
CTCGTTT14950.0047539845.8209841
GTTTATT29009.698015E-75.50149871
GTTATAT24154.864025E-55.4051991
GTCAAAT17850.00572572745.2815511
CTCCGGA21100.00135261895.1554331
GTTTGAT24503.4730486E-45.03198341
Produced by FastQC (version 0.11.5)