FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013807

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013807
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences988200
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTCGGA8150.0092794267.51292851
CCCGGAT11800.00514212586.3421281
CAAAGAT14800.00132020895.9759371
AAAGATG16050.0035599445.4982472
CTTTTAT16200.00387008655.4594971
CTTTCAT16650.00534344145.31194351
CTTTTGC19700.00126609755.18023351
Produced by FastQC (version 0.11.5)