FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013811

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013811
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1147653
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCCGAA11803.244558E-47.3791711
CAAACTT12254.985143E-47.10809951
CCCGCAC11650.00229054576.8513331
CAACACC13100.0077990046.09297941
CTTTTTT48100.05.7325371
TTCAATT16850.00302694465.57433272
Produced by FastQC (version 0.11.5)