FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013823

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013823
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1101153
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCAGC5700.00253271810.1871491
CTATTCT8150.0051978028.0153491
CTTGAAT13151.7084634E-57.72751431
ACACATC8450.007509157.69320772
GGTCTGG8650.008860857.5520341
GTATAAT10500.00635687776.91270831
CTATTAT14900.0045300045.8456461
CCTGCAT15150.0054489355.7491831
CTTTCAA21152.3330777E-45.49094531
Produced by FastQC (version 0.11.5)