FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013824

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013824
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences732299
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGCGT3800.00132304713.521121
CCCTTCC3900.001609157313.1744251
CCCCTTT5501.2739847E-412.0109691
GTCCATA5700.002306302810.30180551
AAGAATC9703.588238E-48.152652
CACCGAT8250.0052404128.0073121
CTTTAAT8650.0080109977.63703251
CTTTTTG17901.2392446E-46.1508681
CTATACG3700.0086470275.82864678
Produced by FastQC (version 0.11.5)