FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013829

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013829
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1034264
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCACT5900.00354931839.7804171
ATTGCTA6300.00630597639.12188
ATATAGT11300.00184619856.99270776
CTTTTAT22154.053436E-86.8385661
AAACTTC13300.00142419856.481285
AATTTTG17902.421524E-56.4209325
CTTCCAA12800.0065234376.1987221
CACTCGT2700.00979855755.9608164120-124
AACTTCT14900.00508254865.78530366
CAAAAAG26356.4647884E-65.47480731
Produced by FastQC (version 0.11.5)