FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013830

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013830
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1009687
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTCGAG1400.00448093130.860552145
CCCAAAT5903.7746664E-410.685511
CGACGAA10950.00172709677.03693061
AATTCAA12600.0078973886.08544455
ATTCTCC12700.0085703196.03752766
CTCAAAA12950.0099625315.95014571
CTTCCAT16000.0023636455.6915181
CTCAGTT3800.00138519165.5114884110-114
Produced by FastQC (version 0.11.5)