FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013833

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013833
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences516763
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTCTC2206.0891267E-419.6793371
CTCTGAT3250.00823790513.3213981
GATCCCG4250.003589647411.8376275
AATGCCC4300.00391762511.6999817
CAAAGAT6150.00497690779.386351
CTTTCTT9252.0614752E-48.58091
Produced by FastQC (version 0.11.5)