FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013848

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013848
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1478280
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCAGACC10850.0094055916.6383352
CCACGAT13700.00186514326.32857131
CTAAAAT15100.00553046175.74181651
ATTTGCC18200.00132498535.530156
CAAGAAG31304.444033E-65.0783581
Produced by FastQC (version 0.11.5)