FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013851

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013851
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences931257
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCGAA7250.00174615539.0421451
CCCAGAT7450.00223624088.7994031
CGAAAAC11201.8495786E-58.4545841
CTTCCCA7950.0040250478.2459811
CTCAAAA13001.1854489E-47.28395031
CCAAAAT11900.00274963426.7330631
CTTCAAC12250.0037263676.54068951
ATCAAGA15107.389369E-46.27095031
ACAAAAG13200.0088980016.01553256
CTTCATT14550.00334073846.00738141
TTCCTTC14850.0046333745.83355672
Produced by FastQC (version 0.11.5)