FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013855

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013855
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences600379
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAGCT950.00547065729.6261028
CACGTCT2750.003214888315.3517089
GCACACG3650.001342727613.4940826
AAGCACG4200.003851918511.7269995
CTCGCGG4350.004864047711.3661651
Produced by FastQC (version 0.11.5)