FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013857

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013857
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2133545
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGGA12104.8155375E-47.13036541
CTACAAT19851.0781927E-45.7952931
CTTTGAT36858.5310603E-105.65817551
CACAAGA15750.0093006135.4779311
AAGTTTG24203.5550055E-45.0240415
CCCGGCG20100.0045982925.007811
Produced by FastQC (version 0.11.5)