FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013865

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013865
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences562910
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGCT2900.003748061415.0015921
CCCATTC4600.00606665311.0337791
GTTCAAT6900.00115764159.4575251
AAGGGCA6350.00660074469.0699094
CTTTAAA10205.6108966E-47.81945751
CAAAGAT11750.00252025646.7879551
CTTTATT13600.00164493196.39773751
AAAGATT15007.828155E-46.2398962
AGCCCAG3000.00535627735.758880690-94
Produced by FastQC (version 0.11.5)