FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013866

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013866
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences942737
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCCCAC4850.00926910110.4226836
TATTACT7800.00366378028.3324187
CCCATCA8100.00462243858.1203071
CTTAAAA11200.00140000877.1777711
CAATGAA12300.00375539046.53585671
CTTCTTT25456.545997E-86.3175671
CTTTCAT14300.00265139066.1328191
CTTTTAT17350.00373437375.47594171
Produced by FastQC (version 0.11.5)