FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013868

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013868
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences506732
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAG4152.1965096E-413.6304951
GTATAAT5800.00373297359.719176
GTTTGAT6050.0051389979.3498431
ACAAAGT6200.00646754639.0921273
GTTCATC7750.0041743698.2112741
CTCACTC1950.0041309557.22850232
TTGATTT13100.00148752386.4547163
Produced by FastQC (version 0.11.5)